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» Accelerated Genetic Algorithms with Markov Chains
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WWW
2004
ACM
14 years 7 months ago
Updating pagerank with iterative aggregation
We present an algorithm for updating the PageRank vector [1]. Due to the scale of the web, Google only updates its famous PageRank vector on a monthly basis. However, the Web chan...
Amy Nicole Langville, Carl Dean Meyer
SAC
2008
ACM
13 years 5 months ago
Computational methods for complex stochastic systems: a review of some alternatives to MCMC
We consider analysis of complex stochastic models based upon partial information. MCMC and reversible jump MCMC are often the methods of choice for such problems, but in some situ...
Paul Fearnhead
STOC
2006
ACM
129views Algorithms» more  STOC 2006»
14 years 6 months ago
Optimal phylogenetic reconstruction
One of the major tasks of evolutionary biology is the reconstruction of phylogenetic trees from molecular data. The evolutionary model is given by a Markov chain on the true evolu...
Constantinos Daskalakis, Elchanan Mossel, Sé...
BMCBI
2006
223views more  BMCBI 2006»
13 years 6 months ago
PSMIX: an R package for population structure inference via maximum likelihood method
Background: Inference of population stratification and individual admixture from genetic markers is an integrative part of a study in diverse situations, such as association mappi...
Baolin Wu, Nianjun Liu, Hongyu Zhao
BMCBI
2007
153views more  BMCBI 2007»
13 years 6 months ago
Estimating genealogies from linked marker data: a Bayesian approach
Background: Answers to several fundamental questions in statistical genetics would ideally require knowledge of the ancestral pedigree and of the gene flow therein. A few examples...
Dario Gasbarra, Matti Pirinen, Mikko J. Sillanp&au...