Sciweavers

25 search results - page 2 / 5
» Accelerating Molecular Dynamics Simulations with GPUs
Sort
View
FPL
2005
Springer
144views Hardware» more  FPL 2005»
15 years 5 months ago
Accelerating Molecular Dynamics Simulations With Configurable Circuits
Molecular Dynamics (MD) is of central importance to computational chemistry. Here we show that MD can be implemented efficiently on a COTS FPGA board, and that speedups from ¿½...
Yongfeng Gu, Tom Van Court, Martin C. Herbordt
FPL
2006
Springer
123views Hardware» more  FPL 2006»
15 years 3 months ago
Improved Interpolation and System Integration for FPGA-Based Molecular Dynamics Simulations
: FPGA-based acceleration of molecular dynamics (MD) has been the subject of several recent studies. Here we describe a new non-bonded force computation pipeline implemented on a 2...
Yongfeng Gu, Tom Van Court, Martin C. Herbordt
FPL
2008
Springer
180views Hardware» more  FPL 2008»
15 years 1 months ago
Compiled hardware acceleration of Molecular Dynamics code
The objective of Molecular Dynamics (MD) simulations is to determine the shape of a molecule in a given biomolecular environment. These simulations are very demanding computationa...
Jason R. Villarreal, Walid A. Najjar
IPPS
2010
IEEE
14 years 9 months ago
Improving numerical reproducibility and stability in large-scale numerical simulations on GPUs
The advent of general purpose graphics processing units (GPGPU's) brings about a whole new platform for running numerically intensive applications at high speeds. Their multi-...
Michela Taufer, Omar Padron, Philip Saponaro, Sand...
FCCM
2007
IEEE
169views VLSI» more  FCCM 2007»
15 years 6 months ago
FPGA-Based Multigrid Computation for Molecular Dynamics Simulations
Abstract: FPGA-based acceleration of molecular dynamics (MD) has been the subject of several recent studies. Implementing long-range forces, however, has only recently been address...
Yongfeng Gu, Martin C. Herbordt