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BMCBI
2005
100views more  BMCBI 2005»
14 years 9 months ago
EvDTree: structure-dependent substitution profiles based on decision tree classification of 3D environments
Background: Structure-dependent substitution matrices increase the accuracy of sequence alignments when the 3D structure of one sequence is known, and are successful e.g. in fold ...
Jean-Christophe Gelly, Laurent Chiche, Jér&...
LWA
2008
14 years 11 months ago
Towards CoPing with Information Overload
The problem of information overload has been addressed by several systems. However, many approaches are limited to informal artifacts and need to refer to the user for reference o...
Christine Müller
LCTRTS
2004
Springer
15 years 3 months ago
Finding effective compilation sequences
Most modern compilers operate by applying a fixed, program-independent sequence of optimizations to all programs. Compiler writers choose a single “compilation sequence”, or ...
L. Almagor, Keith D. Cooper, Alexander Grosul, Tim...
SIGMOD
2010
ACM
231views Database» more  SIGMOD 2010»
15 years 2 months ago
Automatically incorporating new sources in keyword search-based data integration
Scientific data offers some of the most interesting challenges in data integration today. Scientific fields evolve rapidly and accumulate masses of observational and experiment...
Partha Pratim Talukdar, Zachary G. Ives, Fernando ...
BMCBI
2004
117views more  BMCBI 2004»
14 years 9 months ago
CisOrtho: A program pipeline for genome-wide identification of transcription factor target genes using phylogenetic footprinting
Background: All known genomes code for a large number of transcription factors. It is important to develop methods that will reveal how these transcription factors act on a genome...
Henry R. Bigelow, Adam S. Wenick, Allan Wong, Oliv...