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» Additive risk survival model with microarray data
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CIKM
2009
Springer
15 years 4 months ago
Reducing the risk of query expansion via robust constrained optimization
We introduce a new theoretical derivation, evaluation methods, and extensive empirical analysis for an automatic query expansion framework in which model estimation is cast as a r...
Kevyn Collins-Thompson
GPB
2010
231views Solid Modeling» more  GPB 2010»
14 years 7 months ago
Mining Gene Expression Profiles: An Integrated Implementation of Kernel Principal Component Analysis and Singular Value Decompos
The detection of genes that show similar profiles under different experimental conditions is often an initial step in inferring the biological significance of such genes. Visualiz...
Ferran Reverter, Esteban Vegas, Pedro Sánch...
BMCBI
2006
94views more  BMCBI 2006»
14 years 9 months ago
Noise-injected neural networks show promise for use on small-sample expression data
Background: Overfitting the data is a salient issue for classifier design in small-sample settings. This is why selecting a classifier from a constrained family of classifiers, on...
Jianping Hua, James Lowey, Zixiang Xiong, Edward R...
BMCBI
2006
153views more  BMCBI 2006»
14 years 9 months ago
Intensity-based hierarchical Bayes method improves testing for differentially expressed genes in microarray experiments
Background: The small sample sizes often used for microarray experiments result in poor estimates of variance if each gene is considered independently. Yet accurately estimating v...
Maureen A. Sartor, Craig R. Tomlinson, Scott C. We...
BMCBI
2008
146views more  BMCBI 2008»
14 years 9 months ago
Rank-based edge reconstruction for scale-free genetic regulatory networks
Background: The reconstruction of genetic regulatory networks from microarray gene expression data has been a challenging task in bioinformatics. Various approaches to this proble...
Guanrao Chen, Peter Larsen, Eyad Almasri, Yang Dai