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172
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BMCBI
2010
153views more  BMCBI 2010»
15 years 4 months ago
Metamotifs - a generative model for building families of nucleotide position weight matrices
Background: Development of high-throughput methods for measuring DNA interactions of transcription factors together with computational advances in short motif inference algorithms...
Matias Piipari, Thomas A. Down, Tim J. P. Hubbard
132
Voted
BMCBI
2008
130views more  BMCBI 2008»
15 years 4 months ago
Function approximation approach to the inference of reduced NGnet models of genetic networks
Background: The inference of a genetic network is a problem in which mutual interactions among genes are deduced using time-series of gene expression patterns. While a number of m...
Shuhei Kimura, Katsuki Sonoda, Soichiro Yamane, Hi...
FGCS
2006
74views more  FGCS 2006»
15 years 4 months ago
A performance model of non-deterministic particle transport on large-scale systems
In this work we present a predictive analytical model that encompasses the performance and scaling characteristics of a nondeterministic particle transport application, MCNP (Mont...
Mark M. Mathis, Darren J. Kerbyson, Adolfy Hoisie
JCB
2006
129views more  JCB 2006»
15 years 4 months ago
GenRate: A Generative Model that Reveals Novel Transcripts in Genome-Tiling Microarray Data
Genome-wide microarray designs containing millions to hundreds of millions of probes are available for a variety of mammals, including mouse and human. These genome tiling arrays ...
Brendan J. Frey, Quaid Morris, Timothy R. Hughes
JTAER
2008
175views more  JTAER 2008»
15 years 4 months ago
A Core Component-based Modelling Approach for Achieving e-Business Semantics Interoperability
The adoption of advanced integration technologies that enable private and public organizations to seamlessly execute their business transactions electronically is still relatively...
Till Janner, Fenareti Lampathaki, Volker Hoyer, Sp...