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GECCO
2005
Springer
140views Optimization» more  GECCO 2005»
15 years 7 months ago
MDGA: motif discovery using a genetic algorithm
Computationally identifying transcription factor binding sites in the promoter regions of genes is an important problem in computational biology and has been under intensive resea...
Dongsheng Che, Yinglei Song, Khaled Rasheed
IFL
2005
Springer
207views Formal Methods» more  IFL 2005»
15 years 7 months ago
A Dependently Typed Framework for Static Analysis of Program Execution Costs
Abstract. This paper considers the use of dependent types to capture information about dynamic resource usage in a static type system. Dependent types allow us to give (explicit) p...
Edwin Brady, Kevin Hammond
ILP
2005
Springer
15 years 7 months ago
Deriving a Stationary Dynamic Bayesian Network from a Logic Program with Recursive Loops
Recursive loops in a logic program present a challenging problem to the PLP framework. On the one hand, they loop forever so that the PLP backward-chaining inferences would never s...
Yi-Dong Shen, Qiang Yang
ISSTA
2004
ACM
15 years 7 months ago
An optimizing compiler for batches of temporal logic formulas
Model checking based on validating temporal logic formulas has proven practical and effective for numerous software engineering applications. As systems based on this approach ha...
James Ezick
ISAAC
2004
Springer
125views Algorithms» more  ISAAC 2004»
15 years 6 months ago
Local Gapped Subforest Alignment and Its Application in Finding RNA Structural Motifs
RNA molecules whose secondary structures contain similar substructures often have similar functions. Therefore, an important task in the study of RNA is to develop methods for disc...
Jesper Jansson, Ngo Trung Hieu, Wing-Kin Sung