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BMCBI
2006
203views more  BMCBI 2006»
14 years 9 months ago
Independent component analysis reveals new and biologically significant structures in micro array data
Background: An alternative to standard approaches to uncover biologically meaningful structures in micro array data is to treat the data as a blind source separation (BSS) problem...
Attila Frigyesi, Srinivas Veerla, David Lindgren, ...
BMCBI
2006
374views more  BMCBI 2006»
14 years 9 months ago
AMDA: an R package for the automated microarray data analysis
Background: Microarrays are routinely used to assess mRNA transcript levels on a genome-wide scale. Large amount of microarray datasets are now available in several databases, and...
Mattia Pelizzola, Norman Pavelka, Maria Foti, Paol...
TYPES
2000
Springer
15 years 1 months ago
A Tour with Constructive Real Numbers
Abstract. The aim of this work is to characterize constructive real numbers through a minimal axiomatization. We introduce, discuss and justify 16 constructive axioms. Then we addr...
Alberto Ciaffaglione, Pietro Di Gianantonio
ASPLOS
2008
ACM
14 years 11 months ago
Optimistic parallelism benefits from data partitioning
Recent studies of irregular applications such as finite-element mesh generators and data-clustering codes have shown that these applications have a generalized data parallelism ar...
Milind Kulkarni, Keshav Pingali, Ganesh Ramanaraya...
BMCBI
2007
123views more  BMCBI 2007»
14 years 9 months ago
Heritable clustering and pathway discovery in breast cancer integrating epigenetic and phenotypic data
Background: In order to recapitulate tumor progression pathways using epigenetic data, we developed novel clustering and pathway reconstruction algorithms, collectively referred t...
Zailong Wang, Pearlly Yan, Dustin P. Potter, Chari...