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» Agent-based protein structure prediction
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GECCO
2007
Springer
154views Optimization» more  GECCO 2007»
15 years 6 months ago
A novel ab-initio genetic-based approach for protein folding prediction
In this paper, a model based on genetic algorithms for protein folding prediction is proposed. The most important features of the proposed approach are: i) Heuristic secondary str...
Sergio Raul Duarte Torres, David Camilo Becerra Ro...
JOBIM
2000
15 years 3 months ago
InterDB, a Prediction-Oriented Protein Interaction Database for C. elegans
Protein-protein interactions are critical to many biological processes, extending from the formation of cellular macromolecular structures and enzymatic complexes to the regulation...
Nicolas Thierry-Mieg, Laurent Trilling
NAR
2007
128views more  NAR 2007»
14 years 11 months ago
Berkeley Phylogenomics Group web servers: resources for structural phylogenomic analysis
Phylogenomic analysis addresses the limitations of function prediction based on annotation transfer, and has been shown to enable the highest accuracy in prediction of protein mol...
Jake Gunn Glanville, Dan Kirshner, Nandini Krishna...
BMCBI
2007
144views more  BMCBI 2007»
14 years 12 months ago
Motif kernel generated by genetic programming improves remote homology and fold detection
Background: Protein remote homology detection is a central problem in computational biology. Most recent methods train support vector machines to discriminate between related and ...
Tony Håndstad, Arne J. H. Hestnes, Pål...
CSB
2005
IEEE
160views Bioinformatics» more  CSB 2005»
15 years 5 months ago
Predicting Continuous Epitopes in Proteins
The ability to predict antigenic sites on proteins is crucial for the production of synthetic peptide vaccines and synthetic peptide probes of antibody structure. Large number of ...
Reeti Tandon, Sudeshna Adak, Brion Sarachan, Willi...