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BIBM
2008
IEEE
110views Bioinformatics» more  BIBM 2008»
15 years 11 months ago
Genome Alignments Using MPI-LAGAN
We develop a parallel algorithm for a widely used whole genome alignment method called LAGAN. We use the MPI-based protocol to develop parallel solutions for two phases of the alg...
Ruinan Zhang, Huzefa Rangwala, George Karypis
CVGIP
2010
182views more  CVGIP 2010»
15 years 4 months ago
MCCD: Multi-core collision detection between deformable models using front-based decomposition
We present a novel parallel algorithm for fast continuous collision detection (CCD) between deformable models using multi-core processors. We use a hierarchical representation to ...
Min Tang, Dinesh Manocha, Ruofeng Tong
EUROPAR
2009
Springer
15 years 9 months ago
Distributed Data Partitioning for Heterogeneous Processors Based on Partial Estimation of Their Functional Performance Models
The paper presents a new data partitioning algorithm for parallel computing on heterogeneous processors. Like traditional functional partitioning algorithms, the algorithm assumes ...
Alexey L. Lastovetsky, Ravi Reddy
PDP
2009
IEEE
15 years 11 months ago
Byte-Range Asynchronous Locking in Distributed Settings
This paper investigate a mutual exclusion algorithm on distributed systems. We introduce a new algorithm based on the Naimi-Trehel algorithm, taking advantage of the distributed a...
Martin Quinson, Flavien Vernier
PPOPP
2010
ACM
16 years 2 months ago
GAMBIT: effective unit testing for concurrency libraries
As concurrent programming becomes prevalent, software providers are investing in concurrency libraries to improve programmer productivity. Concurrency libraries improve productivi...
Katherine E. Coons, Sebastian Burckhardt, Madanlal...