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108
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RECOMB
2004
Springer
16 years 2 months ago
Chromosomal breakpoint re-use in the inference of genome sequence rearrangement
In order to apply gene-order rearrangement algorithms to the comparison of genome sequences, Pevzner and Tesler [9] bypass gene finding and ortholog identification, and use the or...
David Sankoff, Phil Trinh
120
Voted
BMCBI
2008
122views more  BMCBI 2008»
15 years 2 months ago
Grammar-based distance in progressive multiple sequence alignment
Background: We propose a multiple sequence alignment (MSA) algorithm and compare the alignment-quality and execution-time of the proposed algorithm with that of existing algorithm...
David J. Russell, Hasan H. Otu, Khalid Sayood
138
Voted
PAKDD
2001
ACM
148views Data Mining» more  PAKDD 2001»
15 years 6 months ago
Scalable Hierarchical Clustering Method for Sequences of Categorical Values
Data clustering methods have many applications in the area of data mining. Traditional clustering algorithms deal with quantitative or categorical data points. However, there exist...
Tadeusz Morzy, Marek Wojciechowski, Maciej Zakrzew...
102
Voted
ISBI
2004
IEEE
16 years 3 months ago
Subpixel Registration in Renal Perfusion MR Image Sequence
We propose a subpixel registration algorithm to deal with the motion induced by breathing for renal perfusion MR image sequences. Our approach minimizes an energy functional that ...
Chien Ho, José M. F. Moura, Ying Sun
RECOMB
2008
Springer
16 years 2 months ago
Spectrum Fusion: Using Multiple Mass Spectra for De Novo Peptide Sequencing
We report on a new algorithm for combining the information from several mass spectra of the same peptide. The algorithm automatically learns peptide fragmentation patterns, so that...
Ritendra Datta, Marshall W. Bern