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    COCOA
    2007
    Springer
    110views Discrete Geometry» more  COCOA 2007»
    A New Dynamic Programming Algorithm for Multiple Sequence Alignment
    15 years 4 months ago
    A New Dynamic Programming Algorithm for Multiple Sequence Alignment
    Download  www.info.univ-angers.fr
    Abstract. Multiple sequence alignment (MSA) is one of the most basic and central tasks for many studies in modern biology. In this paper, we present a new progressive alignment alg...
    Jean-Michel Richer, Vincent Derrien, Jin-Kao Hao
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    TCS
    2008
    175views Theoretical Computer Science» more  TCS 2008»
    The cost of offline binary search tree algorithms and the complexity of the request sequence
    14 years 9 months ago
    The cost of offline binary search tree algorithms and the complexity of the request sequence
    Download  www.cs.tut.fi
    In evaluating the performance of online algorithms for search trees, one wants to compare them to the best offline algorithm available. In this paper we lower bound the cost of an...
    Jussi Kujala, Tapio Elomaa
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    ACRI
    2008
    Springer
    201views Artificial Intelligence» more  ACRI 2008»
    Automatic Design of FPGA Processor for the Backtracking of DNA Sequences Evolution Using Cellular Automata and Genetic Algorithm
    15 years 4 months ago
    Automatic Design of FPGA Processor for the Backtracking of DNA Sequences Evolution Using Cellular Automata and Genetic Algorithm
    Download  www.ece.gatech.edu
    In several cases, the DNA sequences of an organism are available in different stages of its evolution and it is desirable to reconstruct the DNA sequence in a previous evolution st...
    Georgios Ch. Sirakoulis
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    JPDC
    2007
    167views more  JPDC 2007»
    On the design of high-performance algorithms for aligning multiple protein sequences on mesh-based multiprocessor architectures
    14 years 9 months ago
    On the design of high-performance algorithms for aligning multiple protein sequences on mesh-based multiprocessor architectures
    Download  www.cc.gatech.edu
    In this paper, we address the problem of multiple sequence alignment (MSA) for handling very large number of proteins sequences on mesh-based multiprocessor architectures. As the ...
    Diana H. P. Low, Bharadwaj Veeravalli, David A. Ba...
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    ESWA
    2007
    100views more  ESWA 2007»
    Using memetic algorithms with guided local search to solve assembly sequence planning
    14 years 9 months ago
    Using memetic algorithms with guided local search to solve assembly sequence planning
    Download  ir.lib.ncut.edu.tw
    The goal of assembly planning consists in generating feasible sequences to assemble a product and selecting an efficient assembly sequence from which related constraint factors su...
    Hwai-En Tseng, Wen-Pai Wang, Hsun-Yi Shih
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