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NIPS
2008
14 years 11 months ago
An Empirical Analysis of Domain Adaptation Algorithms for Genomic Sequence Analysis
We study the problem of domain transfer for a supervised classification task in mRNA splicing. We consider a number of recent domain transfer methods from machine learning, includ...
Gabriele Schweikert, Christian Widmer, Bernhard Sc...
SDM
2009
SIAM
161views Data Mining» more  SDM 2009»
15 years 7 months ago
Polynomial-Delay and Polynomial-Space Algorithms for Mining Closed Sequences, Graphs, and Pictures in Accessible Set Systems.
In this paper, we study efficient closed pattern mining in a general framework of set systems, which are families of subsets ordered by set-inclusion with a certain structure, pro...
Hiroki Arimura, Takeaki Uno
DIS
2009
Springer
15 years 4 months ago
Contrasting Sequence Groups by Emerging Sequences
Abstract. Group comparison per se is a fundamental task in many scientific endeavours but is also the basis of any classifier. Contrast sets and emerging patterns contrast betwee...
Kang Deng, Osmar R. Zaïane
RECOMB
2006
Springer
15 years 10 months ago
Algorithms to Distinguish the Role of Gene-Conversion from Single-Crossover Recombination in the Derivation of SNP Sequences in
Meiotic recombination is a fundamental biological event and one of the principal evolutionary forces responsible for shaping genetic variation within species. In addition to its fu...
Yun S. Song, Zhihong Ding, Dan Gusfield, Charles H...
SIGSOFT
2005
ACM
15 years 10 months ago
Permissive interfaces
A modular program analysis considers components independently and provides succinct summaries for each component, which can be used when checking the rest of the system. Consider ...
Thomas A. Henzinger, Ranjit Jhala, Rupak Majumdar