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105
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SIAMSC
2008
131views more  SIAMSC 2008»
15 years 14 days ago
Fast Monte Carlo Simulation Methods for Biological Reaction-Diffusion Systems in Solution and on Surfaces
Many important physiological processes operate at time and space scales far beyond those accessible to atom-realistic simulations, and yet discrete stochastic rather than continuum...
Rex A. Kerr, Thomas M. Bartol, Boris Kaminsky, Mar...
109
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BMCBI
2005
124views more  BMCBI 2005»
15 years 14 days ago
ErmineJ: Tool for functional analysis of gene expression data sets
Background: It is common for the results of a microarray study to be analyzed in the context of biologically-motivated groups of genes such as pathways or Gene Ontology categories...
Homin K. Lee, William Braynen, Kiran Keshav, Paul ...
BMCBI
2005
86views more  BMCBI 2005»
15 years 14 days ago
WebArray: an online platform for microarray data analysis
Background: Many cutting-edge microarray analysis tools and algorithms, including commonly used limma and affy packages in Bioconductor, need sophisticated knowledge of mathematic...
Xiaoqin Xia, Michael McClelland, Yipeng Wang
127
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JSS
2007
121views more  JSS 2007»
15 years 13 days ago
SEAL: A secure communication library for building dynamic group key agreement applications
We present the SEcure communicAtion Library (SEAL), a Linux-based C language application programming interface (API) library that implements secure group key agreement algorithms ...
Patrick P. C. Lee, John C. S. Lui, David K. Y. Yau
BMCBI
2004
133views more  BMCBI 2004»
15 years 12 days ago
Evaluation of several lightweight stochastic context-free grammars for RNA secondary structure prediction
Background: RNA secondary structure prediction methods based on probabilistic modeling can be developed using stochastic context-free grammars (SCFGs). Such methods can readily co...
Robin D. Dowell, Sean R. Eddy
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