Algorithm Engineering is concerned with the design, analysis, implementation, tuning, debugging and experimental evaluation of computer programs for solving algorithmic problems. ...
We consider the problem of maintaining aggregates over recent elements of a massive data stream. Motivated by applications involving network data, we consider asynchronous data str...
We describe and demonstrate the effectiveness of a method of predicting protein secondary structures, sheet regions in particular, using a class of stochastic tree grammars as rep...
We present a new result concerning the parallelisation of DBSCAN, a Data Mining algorithm for density-based spatial clustering. The overall structure of DBSCAN has been mapped to a...
This paper describes a comprehensive approach to construct quality meshes for implicit solvation models of biomolecular structures starting from atomic resolution data in the Prot...