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CASCON
1996
134views Education» more  CASCON 1996»
15 years 5 months ago
Paradigm shift in software re-engineering: an experience report
Software re-engineering is one of the solutions advocated for the problems that are encountered during maintenance. The three major phases of a re-engineering process are (i) reve...
Kasilingam Periyasamy, C. Mathew
BMCBI
2008
121views more  BMCBI 2008»
15 years 4 months ago
GeneTrailExpress: a web-based pipeline for the statistical evaluation of microarray experiments
Background: High-throughput methods that allow for measuring the expression of thousands of genes or proteins simultaneously have opened new avenues for studying biochemical proce...
Andreas Keller, Christina Backes, Maher Al-Awadhi,...
BMCBI
2007
139views more  BMCBI 2007»
15 years 4 months ago
Significance analysis of microarray transcript levels in time series experiments
Background: Microarray time series studies are essential to understand the dynamics of molecular events. In order to limit the analysis to those genes that change expression over ...
Barbara Di Camillo, Gianna Toffolo, Sreekumaran K....
NAR
2007
135views more  NAR 2007»
15 years 3 months ago
g: Profiler - a web-based toolset for functional profiling of gene lists from large-scale experiments
g:Profiler (http://biit.cs.ut.ee/gprofiler/) is a public web server for characterising and manipulating gene lists resulting from mining high-throughput genomic data. g:Profiler h...
Jüri Reimand, Meelis Kull, Hedi Peterson, Jaa...
JMLR
2012
13 years 6 months ago
Algorithms for Learning Kernels Based on Centered Alignment
This paper presents new and effective algorithms for learning kernels. In particular, as shown by our empirical results, these algorithms consistently outperform the so-called uni...
Corinna Cortes, Mehryar Mohri, Afshin Rostamizadeh