Algorithmic experiments yield large amounts of data that depends on many parameters. This paper collects a number of rules for presenting this data in concise, meaningful, understa...
Background: High density oligonucleotide tiling arrays are an effective and powerful platform for conducting unbiased genome-wide studies. The ab initio probe selection method emp...
Srinka Ghosh, Heather A. Hirsch, Edward A. Sekinge...
Recent years have seen growth in the number of algorithms designed to solve challenging simulation-based nonlinear optimization problems. One such algorithm is the Trust-Region Par...
An experimental computational study to compare the classical primal simplex algorithm and the exterior point algorithms for the transportation problem (TP) is presented. Totally, ...
We improve on earlier FPT algorithms for computing a rooted maximum agreement forest (MAF) or a maximum acyclic agreement forest (MAAF) of a pair of phylogenetic trees. Their sizes...