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IFIP
2004
Springer
15 years 2 months ago
Efficient Algorithms for Handling Molecular Weighted Sequences
Abstract In this paper we introduce the Weighted Suffix Tree, an efficient data structure for computing string regularities in weighted sequences of molecular data. Molecular Wei...
Costas S. Iliopoulos, Christos Makris, Yannis Pana...
79
Voted
EMNLP
2009
14 years 7 months ago
Real-Word Spelling Correction using Google Web 1T 3-grams
We present a method for detecting and correcting multiple real-word spelling errors using the Google Web 1T 3-gram data set and a normalized and modified version of the Longest Co...
Aminul Islam, Diana Inkpen
82
Voted
STRINGOLOGY
2004
14 years 11 months ago
A Note on Bit-Parallel Alignment Computation
Abstract. The edit distance between strings A and B is defined as the minimum number of edit operations needed in converting A into B or vice versa. Typically the allowed edit oper...
Heikki Hyyrö
DIS
2000
Springer
15 years 1 months ago
A Practical Algorithm to Find the Best Subsequence Patterns
Given two sets of strings, consider the problem to find a subsequence that is common to one set but never appears in the other set. The problem is known to be NP-complete. We gene...
Masahiro Hirao, Hiromasa Hoshino, Ayumi Shinohara,...
SPAA
2006
ACM
15 years 3 months ago
The cache complexity of multithreaded cache oblivious algorithms
We present a technique for analyzing the number of cache misses incurred by multithreaded cache oblivious algorithms on an idealized parallel machine in which each processor has a...
Matteo Frigo, Volker Strumpen