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CEC
2011
IEEE
14 years 5 months ago
Comparing alternative energy functions for the HP model of protein structure prediction
Abstract—Protein structure prediction is the problem of finding the functional conformation of a protein given only its amino uence. The HP lattice model is an abstract formulat...
Mario Garza-Fabre, Eduardo Rodriguez-Tello, Gregor...
ICCV
2005
IEEE
16 years 7 months ago
A Graph Cut Algorithm for Generalized Image Deconvolution
The goal of deconvolution is to recover an image x from its convolution with a known blurring function. This is equivalent to inverting the linear system y = Hx. In this paper we ...
Ashish Raj, Ramin Zabih
SAC
2005
ACM
15 years 11 months ago
Finding saddle points using stability boundaries
The task of finding saddle points on potential energy surfaces plays a crucial role in understanding the dynamics of a micro-molecule as well as in studying the folding pathways ...
Chandan K. Reddy, Hsiao-Dong Chiang
BIOCOMP
2009
15 years 7 months ago
Evidence against the Paradigm of Energy Minimization in Protein Design
Abstract-- Stating protein design as an energy minimization in the space of amino acid sequences and rotamer combinations is usual. In the current paper an evolutionary algorithm b...
Andrea Bazzoli, Andrea Tettamanzi
ISBI
2009
IEEE
16 years 21 days ago
Energy Minimization Methods for Cell Motion Correction and Intracellular Analysis in Live-Cell Fluorescence Microscopy
The ultimate aim of many live-cell fluorescence microscopy imaging experiments is the quantitative analysis of the spatial structure and temporal behavior of intracellular object...
Oleh Dzyubachyk, Wiggert A. van Cappellen, Jeroen ...