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» Algorithms for Finding Gene Clusters
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123
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JMLR
2010
113views more  JMLR 2010»
14 years 10 months ago
Optimal Search on Clustered Structural Constraint for Learning Bayesian Network Structure
We study the problem of learning an optimal Bayesian network in a constrained search space; skeletons are compelled to be subgraphs of a given undirected graph called the super-st...
Kaname Kojima, Eric Perrier, Seiya Imoto, Satoru M...
TALG
2010
158views more  TALG 2010»
14 years 10 months ago
Clustering for metric and nonmetric distance measures
We study a generalization of the k-median problem with respect to an arbitrary dissimilarity measure D. Given a finite set P of size n, our goal is to find a set C of size k such t...
Marcel R. Ackermann, Johannes Blömer, Christi...
123
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BMCBI
2010
102views more  BMCBI 2010»
15 years 3 months ago
Alignment and clustering of phylogenetic markers - implications for microbial diversity studies
Background: Molecular studies of microbial diversity have provided many insights into the bacterial communities inhabiting the human body and the environment. A common first step ...
James Robert White, Saket Navlakha, Niranjan Nagar...
116
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CLUSTER
2004
IEEE
15 years 7 months ago
An evaluation of the close-to-files processor and data co-allocation policy in multiclusters
In multicluster systems, and more generally, in grids, jobs may require co-allocation, i.e., the simultaneous allocation of resources such as processors and input files in multipl...
Hashim H. Mohamed, Dick H. J. Epema
118
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BMCBI
2010
146views more  BMCBI 2010»
15 years 3 months ago
Revealing and avoiding bias in semantic similarity scores for protein pairs
Background: Semantic similarity scores for protein pairs are widely applied in functional genomic researches for finding functional clusters of proteins, predicting protein functi...
Jing Wang 0004, Xianxiao Zhou, Jing Zhu, Chenggui ...