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» Algorithms for Finding Gene Clusters
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BMCBI
2006
158views more  BMCBI 2006»
15 years 3 months ago
Parallelization of multicategory support vector machines (PMC-SVM) for classifying microarray data
Background: Multicategory Support Vector Machines (MC-SVM) are powerful classification systems with excellent performance in a variety of data classification problems. Since the p...
Chaoyang Zhang, Peng Li, Arun Rajendran, Youping D...
BMCBI
2007
111views more  BMCBI 2007»
15 years 3 months ago
MotifCombinator: a web-based tool to search for combinations of cis-regulatory motifs
Background: A combination of multiple types of transcription factors and cis-regulatory elements is often required for gene expression in eukaryotes, and the combinatorial regulat...
Mamoru Kato, Tatsuhiko Tsunoda
155
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BMCBI
2007
136views more  BMCBI 2007»
15 years 3 months ago
Prediction of tissue-specific cis-regulatory modules using Bayesian networks and regression trees
Background: In vertebrates, a large part of gene transcriptional regulation is operated by cisregulatory modules. These modules are believed to be regulating much of the tissue-sp...
Xiaoyu Chen, Mathieu Blanchette
134
Voted
HICSS
2008
IEEE
199views Biometrics» more  HICSS 2008»
15 years 10 months ago
Clustering and the Biclique Partition Problem
A technique for clustering data by common attribute values involves grouping rows and columns of a binary matrix to make the minimum number of submatrices all 1’s. As binary mat...
Doina Bein, Linda Morales, Wolfgang W. Bein, C. O....
118
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KDD
2003
ACM
122views Data Mining» more  KDD 2003»
16 years 3 months ago
Natural communities in large linked networks
We are interested in finding natural communities in largescale linked networks. Our ultimate goal is to track changes over time in such communities. For such temporal tracking, we...
John E. Hopcroft, Omar Khan, Brian Kulis, Bart Sel...