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RSFDGRC
2005
Springer
192views Data Mining» more  RSFDGRC 2005»
15 years 8 months ago
An Open Source Microarray Data Analysis System with GUI: Quintet
We address Quintet, an R-based unified cDNA microarray data analysis system with GUI. Five principal categories of microarray data analysis have been coherently integrated in Quin...
Jun-kyoung Choe, Tae-Hoon Chung, Sunyong Park, Hwa...
BMCBI
2007
174views more  BMCBI 2007»
15 years 3 months ago
ESTuber db: an online database for Tuber borchii EST sequences
Background: The ESTuber database (http://www.itb.cnr.it/estuber) includes 3,271 Tuber borchii expressed sequence tags (EST). The dataset consists of 2,389 sequences from an in-hou...
Barbara Lazzari, Andrea Caprera, Cristian Cosentin...
BMCBI
2004
106views more  BMCBI 2004»
15 years 3 months ago
ESTIMA, a tool for EST management in a multi-project environment
Background: Single-pass, partial sequencing of complementary DNA (cDNA) libraries generates thousands of chromatograms that are processed into high quality expressed sequence tags...
Charu G. Kumar, Richard LeDuc, George Gong, Levan ...
BMCBI
2008
141views more  BMCBI 2008»
15 years 3 months ago
The development of PIPA: an integrated and automated pipeline for genome-wide protein function annotation
Background: Automated protein function prediction methods are needed to keep pace with high-throughput sequencing. With the existence of many programs and databases for inferring ...
Chenggang Yu, Nela Zavaljevski, Valmik Desai, Seth...
WWW
2007
ACM
16 years 3 months ago
Extraction and classification of dense communities in the web
The World Wide Web (WWW) is rapidly becoming important for society as a medium for sharing data, information and services, and there is a growing interest in tools for understandi...
Yon Dourisboure, Filippo Geraci, Marco Pellegrini