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» Algorithms for Finding Gene Clusters
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DILS
2008
Springer
15 years 5 months ago
Semi Supervised Spectral Clustering for Regulatory Module Discovery
We propose a novel semi-supervised clustering method for the task of gene regulatory module discovery. The technique uses data on dna binding as prior knowledge to guide the proces...
Alok Mishra, Duncan Gillies
116
Voted
ICDM
2007
IEEE
166views Data Mining» more  ICDM 2007»
15 years 9 months ago
A Divisive Hierarchical Structural Clustering Algorithm for Networks
Many systems in sciences, engineering and nature can be modeled as networks. Examples are internet, metabolic networks and social networks. Network clustering algorithms aimed to ...
Nurcan Yuruk, Mutlu Mete, Xiaowei Xu, Thomas A. J....
124
Voted
CORIA
2008
15 years 4 months ago
Involving Validity Indices in Document Clustering
The goal of any clustering algorithm is to find the optimal clustering solution with the optimal number of clusters. In order to evaluate a clustering solution, a number of validit...
Ahmad El Sayed, Hakim Hacid, Djamel A. Zighed
ICCS
2005
Springer
15 years 8 months ago
Phylogenetic Networks, Trees, and Clusters
Phylogenetic networks model evolutionary histories in the presence of non-treelike events such as hybrid speciation and horizontal gene transfer. In spite of their widely acknowled...
Luay Nakhleh, Li-San Wang
137
Voted
BMCBI
2007
156views more  BMCBI 2007»
15 years 3 months ago
Large-scale clustering of CAGE tag expression data
Background: Recent analyses have suggested that many genes possess multiple transcription start sites (TSSs) that are differentially utilized in different tissues and cell lines. ...
Kazuro Shimokawa, Yuko Okamura-Oho, Takio Kurita, ...