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» Algorithms for Finding Gene Clusters
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179
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BMCBI
2010
104views more  BMCBI 2010»
14 years 10 months ago
A systematic study of genome context methods: calibration, normalization and combination
Background: Genome context methods have been introduced in the last decade as automatic methods to predict functional relatedness between genes in a target genome using the patter...
Luciana Ferrer, Joseph M. Dale, Peter D. Karp
123
Voted
BIBM
2007
IEEE
137views Bioinformatics» more  BIBM 2007»
15 years 9 months ago
A Multi-metric Similarity Based Analysis of Microarray Data
Clustering has been shown to be effective in analyzing functional relationships of genes. However, no single clustering method with single distance metric is capable of capturing ...
Fatih Altiparmak, Selnur Erdal, Ozgur Ozturk, Haka...
SSPR
1998
Springer
15 years 7 months ago
A Statistical Clustering Model and Algorithm
In this paper, a statistical clustering model and algorithm have been discussed. Finding the optimal solution to clustering problem is transformed into simulating the equilibrium ...
Guangwen Yang, Weimin Zheng, Dingxing Wang
123
Voted
CSB
2003
IEEE
128views Bioinformatics» more  CSB 2003»
15 years 8 months ago
Degenerate Primer Design via Clustering
This paper describes a new strategy for designing degenerate primers for a given multiple alignment of amino acid sequences. Degenerate primers are useful for amplifying homologou...
Xintao Wei, David N. Kuhn, Giri Narasimhan
130
Voted
IPPS
1996
IEEE
15 years 7 months ago
Practical Parallel Algorithms for Dynamic Data Redistribution, Median Finding, and Selection
A common statistical problem is that of nding the median element in a set of data. This paper presents a fastand portable parallel algorithm for nding the median given a set of el...
David A. Bader, Joseph JáJá