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» Algorithms for Finding Gene Clusters
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JMLR
2006
103views more  JMLR 2006»
15 years 3 months ago
MinReg: A Scalable Algorithm for Learning Parsimonious Regulatory Networks in Yeast and Mammals
In recent years, there has been a growing interest in applying Bayesian networks and their extensions to reconstruct regulatory networks from gene expression data. Since the gene ...
Dana Pe'er, Amos Tanay, Aviv Regev
GECCO
2005
Springer
156views Optimization» more  GECCO 2005»
15 years 9 months ago
Extraction of informative genes from microarray data
Identification of those genes that might anticipate the clinical behavior of different types of cancers is challenging due to availability of a smaller number of patient samples...
Topon Kumar Paul, Hitoshi Iba
PAMI
2006
134views more  PAMI 2006»
15 years 3 months ago
A Genetic Algorithm Using Hyper-Quadtrees for Low-Dimensional K-means Clustering
The k-means algorithm is widely used for clustering because of its computational efficiency. Given n points in d-dimensional space and the number of desired clusters k, k-means see...
Michael Laszlo, Sumitra Mukherjee
KDD
2001
ACM
169views Data Mining» more  KDD 2001»
16 years 3 months ago
Hierarchical cluster analysis of SAGE data for cancer profiling
In this paper we present a method for clustering SAGE (Serial Analysis of Gene Expression) data to detect similarities and dissimilarities between different types of cancer on the...
Jörg Sander, Monica C. Sleumer, Raymond T. Ng
GECCO
2003
Springer
182views Optimization» more  GECCO 2003»
15 years 8 months ago
Modeling the Search Landscape of Metaheuristic Software Clustering Algorithms
Abstract. Software clustering techniques are useful for extracting architectural information about a system directly from its source code structure. This paper starts by examining ...
Brian S. Mitchell, Spiros Mancoridis