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» Algorithms for Finding Gene Clusters
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108
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RECOMB
2005
Springer
16 years 3 months ago
Modeling the Combinatorial Functions of Multiple Transcription Factors
A considerable fraction of yeast gene promoters are bound by multiple transcription factors. To study the combinatorial interactions of multiple transcription factors is thus impor...
Chen-Hsiang Yeang, Tommi Jaakkola
108
Voted
KDD
2004
ACM
126views Data Mining» more  KDD 2004»
16 years 3 months ago
Turning CARTwheels: an alternating algorithm for mining redescriptions
We present an unusual algorithm involving classification trees-CARTwheels--where two trees are grown in opposite directions so that they are joined at their leaves. This approach ...
Naren Ramakrishnan, Deept Kumar, Bud Mishra, Malco...
130
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SIGIR
2008
ACM
15 years 3 months ago
Algorithmic mediation for collaborative exploratory search
We describe a new approach to information retrieval: algorithmic mediation for intentional, synchronous collaborative exploratory search. Using our system, two or more users with ...
Jeremy Pickens, Gene Golovchinsky, Chirag Shah, Pe...
GECCO
2005
Springer
146views Optimization» more  GECCO 2005»
15 years 9 months ago
An empirical study of the robustness of two module clustering fitness functions
Two of the attractions of search-based software engineering (SBSE) derive from the nature of the fitness functions used to guide the search. These have proved to be highly robust...
Mark Harman, Stephen Swift, Kiarash Mahdavi
KDD
2005
ACM
124views Data Mining» more  KDD 2005»
16 years 3 months ago
A multinomial clustering model for fast simulation of computer architecture designs
Computer architects utilize simulation tools to evaluate the merits of a new design feature. The time needed to adequately evaluate the tradeoffs associated with adding any new fe...
Kaushal Sanghai, Ting Su, Jennifer G. Dy, David R....