211 search results - page 4 / 43 » Algorithms for Loosely Constrained Multiple Sequence Alignme... |
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BMCBI
2007
14 years 9 months ago
2007
Motivation: The quality of progressive sequence alignments strongly depends on the accuracy of the individual pairwise alignment steps since gaps that are introduced at one step c...
GECCO
2005
Springer
15 years 3 months ago
2005
Springer
The problem of multiple sequence alignment is important for bioinformatics. This problem is widely studied and a popular tool to solve this problem is Clustal X. This work introdu...
BMCBI
2005
14 years 9 months ago
2005
Background: We present a complete re-implementation of the segment-based approach to multiple protein alignment that contains a number of improvements compared to the previous ver...
GECCO
2003
Springer
15 years 2 months ago
2003
Springer
This article presents a model for DNA sequence alignment. In our model, a finite state automaton writes two-dimensional maps of nucleotide sequences. An evolutionary method for se...
CJ
2008
14 years 9 months ago
2008
The article surveys parameterized algorithms and complexities for computational tasks on biopolymer sequences, including the problems of longest common subsequence, shortest commo...