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ISCA
2007
IEEE
196views Hardware» more  ISCA 2007»
15 years 6 months ago
Anton, a special-purpose machine for molecular dynamics simulation
The ability to perform long, accurate molecular dynamics (MD) simulations involving proteins and other biological macromolecules could in principle provide answers to some of the ...
David E. Shaw, Martin M. Deneroff, Ron O. Dror, Je...
IPPS
1997
IEEE
15 years 4 months ago
A Tool for On-line Visualization and Interactive Steering of Parallel HPC Applications
Tools for parallel systems today range from specification over debugging to performance analysis and more. Typically, they help the programmers of parallel algorithms from the ea...
Sabine Rathmayer
BMCBI
2008
214views more  BMCBI 2008»
14 years 12 months ago
Accelerating String Set Matching in FPGA Hardware for Bioinformatics Research
Background: This paper describes techniques for accelerating the performance of the string set matching problem with particular emphasis on applications in computational proteomic...
Yoginder S. Dandass, Shane C. Burgess, Mark Lawren...
ECLIPSE
2007
ACM
15 years 3 months ago
Predicting buggy changes inside an integrated development environment
We present a tool that predicts whether the software under development inside an IDE has a bug. An IDE plugin performs this prediction, using the Change Classification technique t...
Janaki T. Madhavan, E. James Whitehead Jr.
DAC
2003
ACM
16 years 21 days ago
Using estimates from behavioral synthesis tools in compiler-directed design space exploration
This paper considers the role of performance and area estimates from behavioral synthesis in design space exploration. We have developed a compilation system that automatically ma...
Byoungro So, Pedro C. Diniz, Mary W. Hall