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» Algorithms for subsequence combinatorics
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AAIM
2006
Springer
75views Algorithms» more  AAIM 2006»
15 years 3 months ago
Subsequence Packing: Complexity, Approximation, and Application
We study the subsequence packing problem: given a string T and a collection of strings {Si}, find disjoint subsequences {Ti} of T with maximum total length such that each Ti is a ...
Minghui Jiang
BIBE
2005
IEEE
126views Bioinformatics» more  BIBE 2005»
15 years 3 months ago
Highly Scalable and Accurate Seeds for Subsequence Alignment
We propose a method for finding seeds for the local alignment of two nucleotide sequences. Our method uses randomized algorithms to find approximate seeds. We present a dynamic ...
Abhijit Pol, Tamer Kahveci
99
Voted
SDM
2007
SIAM
117views Data Mining» more  SDM 2007»
14 years 11 months ago
Discriminating Subsequence Discovery for Sequence Clustering
In this paper, we explore the discriminating subsequencebased clustering problem. First, several effective optimization techniques are proposed to accelerate the sequence mining p...
Jianyong Wang, Yuzhou Zhang, Lizhu Zhou, George Ka...
81
Voted
ENDM
2008
82views more  ENDM 2008»
14 years 9 months ago
Repetition-free longest common subsequence
We study the problem of, given two sequences x and y over a finite alphabet, finding a repetitionfree longest common subsequence of x and y. We show several algorithmic results, a...
Said Sadique Adi, Marília D. V. Braga, Cris...
ICDE
2012
IEEE
212views Database» more  ICDE 2012»
12 years 12 months ago
Attribute-Based Subsequence Matching and Mining
—Sequence analysis is very important in our daily life. Typically, each sequence is associated with an ordered list of elements. For example, in a movie rental application, a cus...
Yu Peng, Raymond Chi-Wing Wong, Liangliang Ye, Phi...