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» Algorithms for subsequence combinatorics
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BMCBI
2010
161views more  BMCBI 2010»
14 years 6 months ago
Addressing the Challenge of Defining Valid Proteomic Biomarkers and Classifiers
Background: The purpose of this manuscript is to provide, based on an extensive analysis of a proteomic data set, suggestions for proper statistical analysis for the discovery of ...
Mohammed Dakna, Keith Harris, Alexandros Kalousis,...
BMCBI
2010
154views more  BMCBI 2010»
14 years 6 months ago
Knowledge-based matrix factorization temporally resolves the cellular responses to IL-6 stimulation
Background: External stimulations of cells by hormones, cytokines or growth factors activate signal transduction pathways that subsequently induce a re-arrangement of cellular gen...
Andreas Kowarsch, Florian Blöchl, Sebastian B...
CORR
2010
Springer
122views Education» more  CORR 2010»
14 years 4 months ago
Concavity of Mutual Information Rate for Input-Restricted Finite-State Memoryless Channels at High SNR
We consider a finite-state memoryless channel with i.i.d. channel state and the input Markov process supported on a mixing finite-type constraint. We discuss the asymptotic behavio...
Guangyue Han, Brian H. Marcus
PR
2011
14 years 4 months ago
A sum-over-paths extension of edit distances accounting for all sequence alignments
This paper introduces a simple Sum-over-Paths (SoP) formulation of string edit distances accounting for all possible alignments between two sequences, and extends related previous...
Silvia García-Díez, François ...
TITB
2010
83views Education» more  TITB 2010»
14 years 4 months ago
Universal glucose models for predicting subcutaneous glucose concentration in humans
This paper tests the hypothesis that a "universal," data-driven model can be developed based on glucose data from one diabetic subject, and subsequently applied to predic...
Adiwinata Gani, Andrei V. Gribok, Yinghui Lu, W. K...