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» Algorithms for the automatic extension of an instruction-set
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BMCBI
2007
135views more  BMCBI 2007»
14 years 11 months ago
Automatic extraction of reliable regions from multiple sequence alignments
Background: High quality multiple alignments are crucial in the transfer of annotation from one genome to another. Multiple alignment methods strive to achieve ever increasing lev...
Timo Lassmann, Erik L. L. Sonnhammer
CVPR
2012
IEEE
13 years 2 months ago
Center-Shift: An approach towards automatic robust mesh segmentation (ARMS)
In the area of 3D shape analysis, research in mesh segmentation has always been an important topic, as it is a fundamental low-level task which can be utilized in many application...
Mengtian Sun, Yi Fang, Karthik Ramani
TREC
2004
15 years 1 months ago
Information Needs and Automatic Queries
Tarragon Consulting Corporation participated in the adhoc retrieval task of the TREC 2004 Genomics Track. We used a standard deployment of the K2 search engine from Verity, Inc. i...
Richard M. Tong
100
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BIOINFORMATICS
2010
116views more  BIOINFORMATICS 2010»
14 years 12 months ago
A principal skeleton algorithm for standardizing confocal images of fruit fly nervous systems
Motivation: The fruit fly (Drosophila melanogaster) is a commonly used model organism in biology. We are currently building a 3D digital atlas of the fruit fly larval nervous syst...
Lei Qu, Hanchuan Peng
PPAM
2007
Springer
15 years 5 months ago
Applying SIMD Approach to Whole Genome Comparison on Commodity Hardware
Abstract. Whole genome comparison compares (aligns) two genome sequences assuming that analogous characteristics may be found. In this paper, we present an SIMD version of the Smit...
Arpith C. Jacob, Marcin Paprzycki, Maria Ganzha, S...