Abstract. We consider the problem of aligning two metabolic pathways. Unlike traditional approaches, we do not restrict the alignment to one-to-one mappings between the molecules o...
As an increasing number of eukaryotic genomes are being sequenced, comparative studies aimed at detecting regulatory elements in intergenic sequences are becoming more prevalent. M...
In this paper we describe a new approach for the well known problem in bioinformatics: Multiple Sequence Alignment (MSA). MSA is fundamental task as it represents an essential pla...
We present a novel paradigm for statistical machine translation (SMT), based on a joint modeling of word alignment and the topical aspects underlying bilingual document-pairs, via...
We present a novel translation model based on tree-to-string alignment template (TAT) which describes the alignment between a source parse tree and a target string. A TAT is capab...