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» Aligning Alignments
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78
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RECOMB
2001
Springer
16 years 1 months ago
Algorithms for phylogenetic footprinting
Phylogenetic footprinting is a comparative genomics approach for predicting transcription factor binding sites, where a set of orthologous regulatory regions are compared and short...
Mathieu Blanchette
103
Voted
ICASSP
2007
IEEE
15 years 7 months ago
Toward Turbo Decoding of RNA Secondary Structure
We propose an iterative probabilistic algorithm for estimation of RNA secondary structure using sequence data from two homologous sequences. The method is intended to exploit inte...
Arif Ozgun Harmanci, Gaurav Sharma, David H. Mathe...
98
Voted
SEMWEB
2009
Springer
15 years 7 months ago
Alignment Results of SOBOM for OAEI 2009
In this paper we give a brief explanation of how Anchor Concept and Sub-Ontology based Ontology Matching (SOBOM) gets the alignment results at OAEI2009. SOBOM deal with the ontolog...
Peigang Xu, Haijun Tao, Tianyi Zang, Yadong Wang
99
Voted
BMCBI
2010
89views more  BMCBI 2010»
15 years 25 days ago
Enhancing metabolomic data analysis with Progressive Consensus Alignment of NMR Spectra (PCANS)
Background: Nuclear magnetic resonance spectroscopy is one of the primary tools in metabolomics analyses, where it is used to track and quantify changes in metabolite concentratio...
Jennifer M. Staab, Thomas M. O'Connell, Shawn M. G...
95
Voted
CVPR
2006
IEEE
16 years 2 months ago
A General Framework and New Alignment Criterion for Dense Optical Flow
The problem of dense optical flow computation is addressed from a variational viewpoint. A new geometric framework is introduced. It unifies previous art and yields new efficient ...
Rami Ben-Ari, Nir A. Sochen