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» Alignment and Distribution is NOT (Always) NP-Hard
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IJCV
2006
266views more  IJCV 2006»
14 years 12 months ago
Kernel Density Estimation and Intrinsic Alignment for Shape Priors in Level Set Segmentation
In this paper, we make two contributions to the field of level set based image segmentation. Firstly, we propose shape dissimilarity measures on the space of level set functions wh...
Daniel Cremers, Stanley Osher, Stefano Soatto
101
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BMCBI
2006
86views more  BMCBI 2006»
14 years 12 months ago
MCALIGN2: Faster, accurate global pairwise alignment of non-coding DNA sequences based on explicit models of indel evolution
Background: Non-coding DNA sequences comprise a very large proportion of the total genomic content of mammals, most other vertebrates, many invertebrates, and most plants. Unravel...
Jun Wang, Peter D. Keightley, Toby Johnson
ISMB
1993
15 years 1 months ago
Using Dirichlet Mixture Priors to Derive Hidden Markov Models for Protein Families
A Bayesian method for estimating the amino acid distributions in the states of a hidden Markov model (HMM) for a protein familyor the columns of a multiple alignment of that famil...
Michael Brown, Richard Hughey, Anders Krogh, I. Sa...
BMCBI
2010
160views more  BMCBI 2010»
14 years 6 months ago
eHive: An Artificial Intelligence workflow system for genomic analysis
Background: The Ensembl project produces updates to its comparative genomics resources with each of its several releases per year. During each release cycle approximately two week...
Jessica Severin, Kathryn Beal, Albert J. Vilella, ...
ASAP
2007
IEEE
123views Hardware» more  ASAP 2007»
15 years 6 months ago
A memcpy Hardware Accelerator Solution for Non Cache-line Aligned Copies
In this paper, we present a hardware solution to perform non cache-line aligned memory copies allowing the commonly used memcpy function to cope with word copies. The main purpose...
Filipa Duarte, Stephan Wong