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» Alignment of Non-Overlapping Sequences
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92
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BMCBI
2008
109views more  BMCBI 2008»
15 years 21 days ago
The meaning of alignment: lessons from structural diversity
Background: Protein structural alignment provides a fundamental basis for deriving principles of functional and evolutionary relationships. It is routinely used for structural cla...
Walter Pirovano, K. Anton Feenstra, Jaap Heringa
106
Voted
BMEI
2008
IEEE
15 years 7 months ago
A New Approach for Tree Alignment Based on Local Re-Optimization
Multiple sequence alignment is the most fundamental task in bioinformatics and computational biology. In this paper, we present a new algorithm to conduct multiple sequences align...
Feng Yue, Jijun Tang
BMCBI
2010
155views more  BMCBI 2010»
14 years 10 months ago
BrEPS: a flexible and automatic protocol to compute enzyme-specific sequence profiles for functional annotation
Background: Models for the simulation of metabolic networks require the accurate prediction of enzyme function. Based on a genomic sequence, enzymatic functions of gene products a...
Constantin Bannert, A. Welfle, C. aus dem Spring, ...
97
Voted
ICMCS
2009
IEEE
158views Multimedia» more  ICMCS 2009»
14 years 10 months ago
Accurate alignment of presentation slides with educational video
Spatio-temporal alignment of electronic slides with corresponding presentation video opens up a number of possibilities for making the instructional content more accessible and un...
Quanfu Fan, Kobus Barnard, Arnon Amir, Alon Efrat
106
Voted
ACL
2009
14 years 10 months ago
Coordinate Structure Analysis with Global Structural Constraints and Alignment-Based Local Features
We propose a hybrid approach to coordinate structure analysis that combines a simple grammar to ensure consistent global structure of coordinations in a sentence, and features bas...
Kazuo Hara, Masashi Shimbo, Hideharu Okuma, Yuji M...