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» Alignment of Non-Overlapping Sequences
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ACSAC
2003
IEEE
15 years 6 months ago
Intrusion Detection: A Bioinformatics Approach
This paper addresses the problem of detecting masquerading, a security attack in which an intruder assumes the identity of a legitimate user. Many approaches based on Hidden Marko...
Scott E. Coull, Joel W. Branch, Boleslaw K. Szyman...
108
Voted
CPM
2005
Springer
125views Combinatorics» more  CPM 2005»
15 years 2 months ago
Parametric Analysis for Ungapped Markov Models of Evolution
We present efficient sensitivity-analysis algorithms for two problems involving Markov models of sequence evolution: ancestral reconstruction in evolutionary trees and local ungap...
David Fernández-Baca, Balaji Venkatachalam
111
Voted
TCBB
2010
114views more  TCBB 2010»
14 years 11 months ago
Cache-Oblivious Dynamic Programming for Bioinformatics
— We present efficient cache-oblivious algorithms for some well-studied string problems in bioinformatics including the longest common subsequence, global pairwise sequence alig...
Rezaul Alam Chowdhury, Hai-son Le, Vijaya Ramachan...
ACL
2009
14 years 10 months ago
Reducing the Annotation Effort for Letter-to-Phoneme Conversion
Letter-to-phoneme (L2P) conversion is the process of producing a correct phoneme sequence for a word, given its letters. It is often desirable to reduce the quantity of training d...
Kenneth Dwyer, Grzegorz Kondrak
114
Voted
ICMLA
2009
14 years 10 months ago
Structured Prediction with Relative Margin
In structured prediction problems, outputs are not confined to binary labels; they are often complex objects such as sequences, trees, or alignments. Support Vector Machine (SVM) ...
Pannagadatta K. Shivaswamy, Tony Jebara