: There are several models for the evolutionary process forming a species tree. We examine the Birth-and-Death model (BDM), the Proportional-to-Distinguishable Arrangements (PDA) m...
Background: We have recently introduced a predictive framework for studying gene transcriptional regulation in simpler organisms using a novel supervised learning algorithm called...
Anshul Kundaje, Manuel Middendorf, Mihir Shah, Chr...
Background: Utilization of alternative initiation sites for protein translation directed by non-AUG codons in mammalian mRNAs is observed with increasing frequency. Alternative in...
Jill L. Wegrzyn, Thomas M. Drudge, Faramarz Valafa...
This paper deals with the problem of inference under uncertain information. This is a generalization of a paper of Cardona et al. (1991a) where rules were not allowed to contain n...
Sparse graphical models have proven to be a flexible class of multivariate probability models for approximating high-dimensional distributions. In this paper, we propose techniques...
Vincent Y. F. Tan, Sujay Sanghavi, John W. Fisher ...