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JBI
2008
159views Bioinformatics» more  JBI 2008»
14 years 10 months ago
SEGS: Search for enriched gene sets in microarray data
Gene Ontology (GO) terms are often used to interpret the results of microarray experiments. The most common approach is to perform Fisher's exact tests to find gene sets anno...
Igor Trajkovski, Nada Lavrac, Jakub Tolar
72
Voted
SAC
2008
ACM
14 years 9 months ago
Pattern ranking for semi-automatic ontology construction
When developing semantic applications, the construction of ontologies is a crucial part. We are developing a semiautomatic ontology construction approach, OntoCase, relying on ont...
Eva Blomqvist
BMCBI
2004
117views more  BMCBI 2004»
14 years 9 months ago
Cancer characterization and feature set extraction by discriminative margin clustering
Background: A central challenge in the molecular diagnosis and treatment of cancer is to define a set of molecular features that, taken together, distinguish a given cancer, or ty...
Kamesh Munagala, Robert Tibshirani, Patrick O. Bro...
BMCBI
2006
114views more  BMCBI 2006»
14 years 10 months ago
Mining frequent patterns for AMP-activated protein kinase regulation on skeletal muscle
Background: AMP-activated protein kinase (AMPK) has emerged as a significant signaling intermediary that regulates metabolisms in response to energy demand and supply. An investig...
Qingfeng Chen, Yi-Ping Phoebe Chen
ISBI
2008
IEEE
15 years 10 months ago
Estimation of cortical multivariate autoregressive models for EEG/MEG using an expectation-maximization algorithm
A new method for estimating multivariate autoregressive (MVAR) models of cortical connectivity from surface EEG or MEG measurements is presented. Conventional approaches to this p...
Bing Leung, Patrick Cheung, Barry D. Van Veen