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» An Algorithm for Assigning Unique Keys to Metabolic Pathways
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BMCBI
2010
223views more  BMCBI 2010»
13 years 1 months ago
MetNetGE: interactive views of biological networks and ontologies
Background: Linking high-throughput experimental data with biological networks is a key step for understanding complex biological systems. Currently, visualization tools for large...
Ming Jia, Suh-Yeon Choi, Dirk Reiners, Eve Syrkin ...
BMCBI
2005
114views more  BMCBI 2005»
13 years 6 months ago
AutoFACT: An Automatic Functional Annotation and Classification Tool
Background: Assignment of function to new molecular sequence data is an essential step in genomics projects. The usual process involves similarity searches of a given sequence aga...
Liisa B. Koski, Michael W. Gray, B. Franz Lang, Ge...
IWMM
1998
Springer
115views Hardware» more  IWMM 1998»
13 years 10 months ago
One-Bit Counts between Unique and Sticky
Stoye's one-bit reference tagging scheme can be extended to local counts of two or more via two strategies. The first, suited to pure register transactions, is a cache of ref...
David J. Roth, David S. Wise
RECOMB
2004
Springer
14 years 6 months ago
Modeling and Analysis of Heterogeneous Regulation in Biological Networks
Abstract. In this study we propose a novel model for the representation of biological networks and provide algorithms for learning model parameters from experimental data. Our appr...
Irit Gat-Viks, Amos Tanay, Ron Shamir
BMCBI
2010
183views more  BMCBI 2010»
13 years 6 months ago
Active learning for human protein-protein interaction prediction
Background: Biological processes in cells are carried out by means of protein-protein interactions. Determining whether a pair of proteins interacts by wet-lab experiments is reso...
Thahir P. Mohamed, Jaime G. Carbonell, Madhavi Gan...