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» An Analysis of Permutations in Arrays
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IJNSEC
2007
82views more  IJNSEC 2007»
14 years 11 months ago
On Software Implementation of Fast DDP-based Ciphers
Data-dependent (DD) permutations (DDP) are discussed as a cryptographic primitive for the design of fast hardware, firmware, and software encryption systems. DDP can be performed...
Nikolay A. Moldovyan, Peter A. Moldovyanu, Douglas...
JDA
2008
122views more  JDA 2008»
14 years 11 months ago
An approximation algorithm for sorting by reversals and transpositions
Abstract. Genome rearrangement algorithms are powerful tools to analyze gene orders in molecular evolution. Analysis of genomes evolving by reversals and transpositions leads to a ...
Atif Rahman, Swakkhar Shatabda, Masud Hasan
BMCBI
2005
137views more  BMCBI 2005»
14 years 11 months ago
ArrayQuest: a web resource for the analysis of DNA microarray data
Background: Numerous microarray analysis programs have been created through the efforts of Open Source software development projects. Providing browser-based interfaces that allow...
Gary L. Argraves, Saurin D. Jani, Jeremy L. Barth,...
BMCBI
2006
100views more  BMCBI 2006»
14 years 11 months ago
Empirical array quality weights in the analysis of microarray data
Background: Assessment of array quality is an essential step in the analysis of data from microarray experiments. Once detected, less reliable arrays are typically excluded or &qu...
Matthew E. Ritchie, Dileepa S. Diyagama, Jody Neil...
BMCBI
2005
180views more  BMCBI 2005»
14 years 11 months ago
arrayCGHbase: an analysis platform for comparative genomic hybridization microarrays
Background: The availability of the human genome sequence as well as the large number of physically accessible oligonucleotides, cDNA, and BAC clones across the entire genome has ...
Björn Menten, Filip Pattyn, Katleen De Preter...