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BMCBI
2007
141views more  BMCBI 2007»
13 years 6 months ago
Using structural motif descriptors for sequence-based binding site prediction
Background: Many protein sequences are still poorly annotated. Functional characterization of a protein is often improved by the identification of its interaction partners. Here, ...
Andreas Henschel, Christof Winter, Wan Kyu Kim, Mi...
SAS
2010
Springer
140views Formal Methods» more  SAS 2010»
13 years 4 months ago
Multi-dimensional Rankings, Program Termination, and Complexity Bounds of Flowchart Programs
Abstract. Proving the termination of a flowchart program can be done by exhibiting a ranking function, i.e., a function from the program states to a wellfounded set, which strictl...
Christophe Alias, Alain Darte, Paul Feautrier, Lau...
CORR
2010
Springer
162views Education» more  CORR 2010»
13 years 6 months ago
Random sampling of lattice paths with constraints, via transportation
We investigate Monte Carlo Markov Chain (MCMC) procedures for the random sampling of some one-dimensional lattice paths with constraints, for various constraints. We will see that...
Lucas Gerin
BMCBI
2010
113views more  BMCBI 2010»
13 years 6 months ago
Improving performance of mammalian microRNA target prediction
Background: MicroRNAs (miRNAs) are single-stranded non-coding RNAs known to regulate a wide range of cellular processes by silencing the gene expression at the protein and/or mRNA...
Hui Liu, Dong Yue, Yidong Chen, Shou-Jiang Gao, Yu...
EUROSYS
2008
ACM
14 years 3 months ago
Documenting and automating collateral evolutions in linux device drivers
The internal libraries of Linux are evolving rapidly, to address new requirements and improve performance. These evolutions, however, entail a massive problem of collateral evolut...
Yoann Padioleau, Julia L. Lawall, René Rydh...