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» An Exact Brownian Dynamics Method for Cell Simulation
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BMCBI
2008
146views more  BMCBI 2008»
14 years 11 months ago
A phase synchronization clustering algorithm for identifying interesting groups of genes from cell cycle expression data
Background: The previous studies of genome-wide expression patterns show that a certain percentage of genes are cell cycle regulated. The expression data has been analyzed in a nu...
Chang Sik Kim, Cheol Soo Bae, Hong Joon Tcha
CPHYSICS
2008
121views more  CPHYSICS 2008»
14 years 11 months ago
A scalable parallel algorithm for large-scale reactive force-field molecular dynamics simulations
A scalable parallel algorithm has been designed to perform multimillion-atom molecular dynamics (MD) simulations, in which first principlesbased reactive force fields (ReaxFF) des...
Ken-ichi Nomura, Rajiv K. Kalia, Aiichiro Nakano, ...
LSMS
2007
Springer
15 years 5 months ago
AOC-by-Self-discovery Modeling and Simulation for HIV
Among HIV, immune cell and drug, exhibit interactions that are usually not well understood and as a result, cannot be accurately modeled. In this paper, Modeling by AOC is to under...
Chunxiao Zhao, Ning Zhong, Ying Hao
TPDS
2002
97views more  TPDS 2002»
14 years 11 months ago
On Distributed Dynamic Channel Allocation in Mobile Cellular Networks
Distributed dynamic channel allocation (DDCA) is a fundamental resource management problem in mobile cellular networks. It has a flavor of distributed mutual exclusion but is not e...
Jianping Jiang, Ten-Hwang Lai, Neelam Soundarajan
BMCBI
2006
117views more  BMCBI 2006»
14 years 11 months ago
A method for estimation of elasticities in metabolic networks using steady state and dynamic metabolomics data and linlog kineti
Background: Dynamic modeling of metabolic reaction networks under in vivo conditions is a crucial step in order to obtain a better understanding of the (dis)functioning of living ...
I. Emrah Nikerel, Wouter A. van Winden, Walter M. ...