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BMCBI
2011
14 years 5 months ago
RAG: An Update to the RNA-As-Graphs Resource
Background: In 2004, we presented a web resource for stimulating the search for novel RNAs, RNA-As-Graphs (RAG), which classified, catalogued, and predicted RNA secondary structur...
Joseph A. Izzo, Namhee Kim, Shereef Elmetwaly, Tam...
PC
2006
124views Management» more  PC 2006»
15 years 1 months ago
Message-passing code generation for non-rectangular tiling transformations
Tiling is a well known loop transformation used to reduce communication overhead in distributed memory machines. Although a lot of theoretical research has been done concerning th...
Georgios I. Goumas, Nikolaos Drosinos, Maria Athan...
KDD
2005
ACM
177views Data Mining» more  KDD 2005»
15 years 7 months ago
Combining partitions by probabilistic label aggregation
Data clustering represents an important tool in exploratory data analysis. The lack of objective criteria render model selection as well as the identification of robust solutions...
Tilman Lange, Joachim M. Buhmann
BMCBI
2011
14 years 8 months ago
Motif-guided sparse decomposition of gene expression data for regulatory module identification
Background: Genes work coordinately as gene modules or gene networks. Various computational approaches have been proposed to find gene modules based on gene expression data; for e...
Ting Gong, Jianhua Xuan, Li Chen, Rebecca B. Riggi...
CANDC
2006
ACM
15 years 1 months ago
Detecting and aligning peaks in mass spectrometry data with applications to MALDI
In this paper, we address the peak detection and alignment problem in the analysis of mass spectrometry data. To deal with the peak redundancy problem existing in the MALDI data a...
Weichuan Yu, Baolin Wu, Ning Lin, Kathy Stone, Ken...