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CPAIOR
2008
Springer
14 years 11 months ago
Amsaa: A Multistep Anticipatory Algorithm for Online Stochastic Combinatorial Optimization
The one-step anticipatory algorithm (1s-AA) is an online algorithm making decisions under uncertainty by ignoring future non-anticipativity constraints. It makes near-optimal decis...
Luc Mercier, Pascal Van Hentenryck
BMCBI
2006
74views more  BMCBI 2006»
14 years 9 months ago
An unsupervised classification scheme for improving predictions of prokaryotic TIS
Background: Although it is not difficult for state-of-the-art gene finders to identify coding regions in prokaryotic genomes, exact prediction of the corresponding translation ini...
Maike Tech, Peter Meinicke
JCB
2000
146views more  JCB 2000»
14 years 9 months ago
Bayesian Segmentation of Protein Secondary Structure
We present a novel method for predicting the secondary structure of a protein from its amino acid sequence. Most existing methods predict each position in turn based on a local wi...
Scott C. Schmidler, Jun S. Liu, Douglas L. Brutlag
RIVF
2008
14 years 10 months ago
Simple but effective methods for combining kernels in computational biology
Complex biological data generated from various experiments are stored in diverse data types in multiple datasets. By appropriately representing each biological dataset as a kernel ...
Hiroaki Tanabe, Tu Bao Ho, Canh Hao Nguyen, Saori ...
BMCBI
2010
113views more  BMCBI 2010»
14 years 9 months ago
Improving performance of mammalian microRNA target prediction
Background: MicroRNAs (miRNAs) are single-stranded non-coding RNAs known to regulate a wide range of cellular processes by silencing the gene expression at the protein and/or mRNA...
Hui Liu, Dong Yue, Yidong Chen, Shou-Jiang Gao, Yu...