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» An Extensible Meta-Model for Program Analysis
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NAR
2010
194views more  NAR 2010»
14 years 6 months ago
AltAnalyze and DomainGraph: analyzing and visualizing exon expression data
Alternative splicing is an important mechanism for increasing protein diversity. However, its functional effects are largely unknown. Here, we present our new software workflow co...
Dorothea Emig, Nathan Salomonis, Jan Baumbach, Tho...
BMCBI
2005
122views more  BMCBI 2005»
14 years 11 months ago
FACT - a framework for the functional interpretation of high-throughput experiments
Background: Interpreting the results of high-throughput experiments, such as those obtained from DNA-microarrays, is an often time-consuming task due to the high number of data-po...
Felix Kokocinski, Nicolas Delhomme, Gunnar Wrobel,...
BMCBI
2007
181views more  BMCBI 2007»
14 years 12 months ago
Versatile annotation and publication quality visualization of protein complexes using POLYVIEW-3D
Background: Macromolecular visualization as well as automated structural and functional annotation tools play an increasingly important role in the post-genomic era, contributing ...
Aleksey A. Porollo, Jaroslaw Meller
CADE
2005
Springer
16 years 1 days ago
An Algorithm for Deciding BAPA: Boolean Algebra with Presburger Arithmetic
We describe an algorithm for deciding the first-order multisorted theory BAPA, which combines 1) Boolean algebras of sets of uninterpreted elements (BA) and 2) Presburger arithmeti...
Viktor Kuncak, Huu Hai Nguyen, Martin C. Rinard
112
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PODS
2006
ACM
138views Database» more  PODS 2006»
15 years 12 months ago
Efficiently ordering subgoals with access constraints
d Abstract] Guizhen Yang Artificial Intelligence Center SRI International Menlo Park, CA 94025, USA Michael Kifer Dept. of Computer Science Stony Brook University Stony Brook, NY 1...
Guizhen Yang, Michael Kifer, Vinay K. Chaudhri