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» An Intelligent System for Comparing Protein Structures
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BMCBI
2007
102views more  BMCBI 2007»
14 years 11 months ago
A comprehensive system for evaluation of remote sequence similarity detection
Background: Accurate and sensitive performance evaluation is crucial for both effective development of better structure prediction methods based on sequence similarity, and for th...
Yuan Qi, Ruslan Sadreyev, Yong Wang, Bong-Hyun Kim...
BMCBI
2011
14 years 3 months ago
In-silico prediction of disorder content using hybrid sequence representation
Background: Intrinsically disordered proteins play important roles in various cellular activities and their prevalence was implicated in a number of human diseases. The knowledge ...
Marcin J. Mizianty, Tuo Zhang, Bin Xue, Yaoqi Zhou...
ML
2008
ACM
174views Machine Learning» more  ML 2008»
14 years 11 months ago
ALLPAD: approximate learning of logic programs with annotated disjunctions
In this paper we present the system ALLPAD for learning Logic Programs with Annotated Disjunctions (LPADs). ALLPAD modifies the previous system LLPAD in order to tackle real world ...
Fabrizio Riguzzi
WWW
2008
ACM
16 years 11 days ago
iRobot: an intelligent crawler for web forums
We study in this paper the Web forum crawling problem, which is a very fundamental step in many Web applications, such as search engine and Web data mining. As a typical user-crea...
Rui Cai, Jiang-Ming Yang, Wei Lai, Yida Wang, Lei ...
BMCBI
2004
177views more  BMCBI 2004»
14 years 11 months ago
Gapped alignment of protein sequence motifs through Monte Carlo optimization of a hidden Markov model
Background: Certain protein families are highly conserved across distantly related organisms and belong to large and functionally diverse superfamilies. The patterns of conservati...
Andrew F. Neuwald, Jun S. Liu