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JMLR
2008
127views more  JMLR 2008»
14 years 9 months ago
Incremental Identification of Qualitative Models of Biological Systems using Inductive Logic Programming
The use of computational models is increasingly expected to play an important role in predicting the behaviour of biological systems. Models are being sought at different scales o...
Ashwin Srinivasan, Ross D. King
87
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IJON
2000
69views more  IJON 2000»
14 years 9 months ago
PARALLEL NEUROSYS: A system for the simulation of very large networks of biologically accurate neurons on parallel computers
We present a software package for the simulation of very large neuronal networks on parallel computers. The package can be run on any system with an implementation of the Message ...
Peter Pacheco, Marcelo Camperi, Toshi Uchino
CAV
2012
Springer
241views Hardware» more  CAV 2012»
13 years 2 days ago
Bma: Visual Tool for Modeling and Analyzing Biological Networks
Abstract. BioModel Analyzer (bma) is a tool for modeling and analyzing biological networks. Designed with a lightweight graphical user interface, the tool facilitates usage for bio...
David Benque, Sam Bourton, Caitlin Cockerton, Byro...
BMCBI
2007
100views more  BMCBI 2007»
14 years 9 months ago
SBMLeditor: effective creation of models in the Systems Biology Markup Language (SBML)
Background: The need to build a tool to facilitate the quick creation and editing of models encoded in the Systems Biology Markup language (SBML) has been growing with the number ...
Nicolas Rodriguez, Marco Donizelli, Nicolas Le Nov...
JCB
2006
185views more  JCB 2006»
14 years 9 months ago
A Probabilistic Methodology for Integrating Knowledge and Experiments on Biological Networks
Biological systems are traditionally studied by focusing on a specific subsystem, building an intuitive model for it, and refining the model using results from carefully designed ...
Irit Gat-Viks, Amos Tanay, Daniela Raijman, Ron Sh...