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BMCBI
2005
156views more  BMCBI 2005»
15 years 4 months ago
A new dynamical layout algorithm for complex biochemical reaction networks
Background: To study complex biochemical reaction networks in living cells researchers more and more rely on databases and computational methods. In order to facilitate computatio...
Katja Wegner, Ursula Kummer
189
Voted
CIKM
2010
Springer
15 years 3 months ago
SHRINK: a structural clustering algorithm for detecting hierarchical communities in networks
Community detection is an important task for mining the structure and function of complex networks. Generally, there are several different kinds of nodes in a network which are c...
Jianbin Huang, Heli Sun, Jiawei Han, Hongbo Deng, ...
WADS
2009
Springer
232views Algorithms» more  WADS 2009»
15 years 11 months ago
On Making Directed Graphs Transitive
We present the first thorough theoretical analysis of the Transitivity Editing problem on digraphs. Herein, the task is to perform a minimum number of arc insertions or deletions ...
Mathias Weller, Christian Komusiewicz, Rolf Nieder...
TCAD
2008
128views more  TCAD 2008»
15 years 4 months ago
Obstacle-Avoiding Rectilinear Steiner Tree Construction Based on Spanning Graphs
Given a set of pins and a set of obstacles on a plane, an obstacle-avoiding rectilinear Steiner minimal tree (OARSMT) connects these pins, possibly through some additional points (...
Chung-Wei Lin, Szu-Yu Chen, Chi-Feng Li, Yao-Wen C...
ICPR
2008
IEEE
16 years 6 months ago
On efficient Viterbi decoding for hidden semi-Markov models
We present algorithms for improved Viterbi decoding for the case of hidden semi-Markov models. By carefully constructing directed acyclic graphs, we pose the decoding problem as t...
Bonnie K. Ray, Jianying Hu, Ritendra Datta