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BMCBI
2006
145views more  BMCBI 2006»
15 years 2 months ago
Fast-Find: A novel computational approach to analyzing combinatorial motifs
Background: Many vital biological processes, including transcription and splicing, require a combination of short, degenerate sequence patterns, or motifs, adjacent to defined seq...
Micah Hamady, Erin Peden, Rob Knight, Ravinder Sin...
CIKM
2006
Springer
15 years 5 months ago
Mining coherent patterns from heterogeneous microarray data
Microarray technology is a powerful tool for geneticists to monitor interactions among tens of thousands of genes simultaneously. There has been extensive research on coherent sub...
Xiang Zhang, Wei Wang 0010
BMCBI
2007
156views more  BMCBI 2007»
15 years 2 months ago
Large-scale clustering of CAGE tag expression data
Background: Recent analyses have suggested that many genes possess multiple transcription start sites (TSSs) that are differentially utilized in different tissues and cell lines. ...
Kazuro Shimokawa, Yuko Okamura-Oho, Takio Kurita, ...
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DAM
2006
69views more  DAM 2006»
15 years 2 months ago
An algorithm to analyze stability of gene-expression patterns
Jutta Gebert, Martin Lätsch, Stefan Wolfgang ...
CIBCB
2009
IEEE
15 years 3 months ago
Steady-state analysis of genetic regulatory networks modeled by nonlinear ordinary differential equations
Although Ordinary Differential Equations (ODEs) have been used to model Genetic Regulatory Networks (GRNs) in many previous works, their steady-state behaviors are not well studied...
Haixin Wang, Lijun Qian, Edward R. Dougherty