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113
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STACS
2005
Springer
15 years 6 months ago
Algorithmics in Exponential Time
Exponential algorithms, i.e. algorithms of complexity O(cn ) for some c > 1, seem to be unavoidable in the case of NP-complete problems (unless P=NP), especially if the problem ...
Uwe Schöning
146
Voted
SPAA
1997
ACM
15 years 5 months ago
A Localized Algorithm for Parallel Association Mining
Discovery of association rules is an important database mining problem. Mining for association rules involves extracting patterns from large databases and inferring useful rules f...
Mohammed Javeed Zaki, Srinivasan Parthasarathy, We...
109
Voted
BMCBI
2008
178views more  BMCBI 2008»
15 years 26 days ago
Identification of coherent patterns in gene expression data using an efficient biclustering algorithm and parallel coordinate vi
Background: The DNA microarray technology allows the measurement of expression levels of thousands of genes under tens/hundreds of different conditions. In microarray data, genes ...
Kin-On Cheng, Ngai-Fong Law, Wan-Chi Siu, Alan Wee...
107
Voted
BMCBI
2007
233views more  BMCBI 2007»
15 years 26 days ago
160-fold acceleration of the Smith-Waterman algorithm using a field programmable gate array (FPGA)
Background: To infer homology and subsequently gene function, the Smith-Waterman (SW) algorithm is used to find the optimal local alignment between two sequences. When searching s...
Isaac T. S. Li, Warren Shum, Kevin Truong
112
Voted
ARITH
1999
IEEE
15 years 5 months ago
Correctness Proofs Outline for Newton-Raphson Based Floating-Point Divide and Square Root Algorithms
This paper describes a study of a class of algorithms for the floating-point divide and square root operations, based on the Newton-Raphson iterative method. The two main goals we...
Marius A. Cornea-Hasegan, Roger A. Golliver, Peter...