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» An analysis framework for search sequences
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BMCBI
2005
94views more  BMCBI 2005»
14 years 11 months ago
Measuring similarities between transcription factor binding sites
Background: Collections of transcription factor binding profiles (Transfac, Jaspar) are essential to identify regulatory elements in DNA sequences. Subsets of highly similar profi...
Szymon M. Kielbasa, Didier Gonze, Hanspeter Herzel
WWW
2009
ACM
16 years 16 days ago
A flight meta-search engine with metamorph
We demonstrate a flight meta-search engine that is based on the Metamorph framework. Metamorph provides mechanisms to model web forms together with the interactions which are need...
Bernhard Krüpl, Wolfgang Holzinger, Yansen Da...
ICWE
2004
Springer
15 years 5 months ago
Automatic Interpretation of Natural Language for a Multimedia E-learning Tool
Abstract. This paper describes the new e-learning tool CHESt that allows students to search in a knowledge base for short (teaching) multimedia clips by using a semantic search eng...
Serge Linckels, Christoph Meinel
ALMOB
2008
95views more  ALMOB 2008»
15 years 8 hour ago
A stitch in time: Efficient computation of genomic DNA melting bubbles
Background: It is of biological interest to make genome-wide predictions of the locations of DNA melting bubbles using statistical mechanics models. Computationally, this poses th...
Eivind Tøstesen
BMCBI
2010
101views more  BMCBI 2010»
14 years 12 months ago
Enrichment of homologs in insignificant BLAST hits by co-complex network alignment
Background: Homology is a crucial concept in comparative genomics. The algorithm probably most widely used for homology detection in comparative genomics, is BLAST. Usually a stri...
Like Fokkens, Sandra M. C. Botelho, Jos Boekhorst,...